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Impact of the removal of N-terminal non-structured amino acids on activity and stability of xylanases from Orpinomyces sp. PC-2

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논문

Impact of the removal of N-terminal non-structured amino acids on activity and stability of xylanases from Orpinomyces sp. PC-2

학술지

International journal of biological macromolecules

저자명

Ventorim, Rafaela Zandonade; de Oliveira Mendes, Tiago Antô nio; Trevizano, Larissa Mattos; dos Santos Camargos, Ana Maria; Guimarã es, Valé ria Monteze

초록

<P><B>Abstract</B></P> <P>Xylanases catalyze the random hydrolysis of xylan backbone from plant biomass and thus, they have application in the production of biofuels, Kraft pulps biobleaching and feed industry. Here, xylanases derived from <I>Orpinomyces</I> sp. PC-2 were engineered guided by molecular dynamics methods to obtain more thermostable enzymes. Based on these models, 27 amino acid residues from the N-terminal were predicted to reduce protein stability and the impact of this removal was validated to two enzyme constructs: small xylanase Wild-Type (SWT) obtained from Wild-Type xylanase (WT) and small xylanase Mutant (SM2) generated from M2 mutant xylanase (V135A, A226T). The tail removal promoted increase in specific activity of purified SWT and SM2, which achieved 5,801.7 and 5,106.8Umg<SUP>&minus;1</SUP> of protein, respectively, while the WT activity was 444.1Umg<SUP>&minus;1</SUP> of protein. WT, SWT and SM2 showed half-life values at 50&deg;C of 0.8, 2.3 and 29.5h, respectively. Overall, in view of the results, we propose that the presence of non-structured amino acid in the N-terminal leads to destabilization of the xylanases and may promote less access of the substrate to the active site. Therefore, its removal may promote increased stability and enzymatic activity, interesting properties that make them suitable for biotechnological applications.</P> <P><B>Highlights</B></P> <P> <UL> <LI> Molecular dynamics analyses indicated that N-terminal tail could destabilize the XynA xylanase from <I>Orpinomyces</I>. </LI> <LI> N-terminal tail removal positively affected the expression and activity of xylanases. </LI> <LI> Engineered xylanases showed high thermostability at 50&deg;C. </LI> </UL> </P> <P><B>Graphical abstract</B></P> <P>[DISPLAY OMISSION]</P>

발행연도

2018

발행기관

Elsevier

라이선스

publisher-specific-oa

ISSN

0141-8130

ISSN

1879-0003

106

페이지

pp.312-319

주제어

Xylanase; Orpinomyces; Thermostability; Molecular dynamics simulation

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1 2023-12-11

논문; 2018-01-01

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