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Characterization and genomic analysis of kraft lignin biodegradation by the beta-proteobacterium Cupriavidus basilensis B-8

메타 데이터

바이오화학분류
    • 바이오플라스틱
      1. 플라스틱
    • 바이오정밀화학
      1. 용매
      2. 화학제품
    • 화장품용 기능성소재
      1. 계면활성제⁄증점제
    • 의료용 화학소재
      1. 건강보조식품
      2. 식품첨가제
논문

Characterization and genomic analysis of kraft lignin biodegradation by the beta-proteobacterium Cupriavidus basilensis B-8

학술지

Biotechnology for biofuels

저자명

Shi, Yan; Chai, Liyuan; Tang, Chongjian; Yang, Zhihui; Zhang, Huan; Chen, Runhua; Chen, Yuehui; Zheng, Yu

초록

<P><B>Background</B></P><P>Lignin materials are abundant and among the most important potential sources for biofuel production. Development of an efficient lignin degradation process has considerable potential for the production of a variety of chemicals, including bioethanol. However, lignin degradation using current methods is inefficient. Given their immense environmental adaptability and biochemical versatility, bacterial could be used as a valuable tool for the rapid degradation of lignin. Kraft lignin (KL) is a polymer by-product of the pulp and paper industry resulting from alkaline sulfide treatment of lignocellulose, and it has been widely used for lignin-related studies.</P><P><B>Results</B></P><P>Beta-proteobacterium <I>Cupriavidus basilensis</I> B-8 isolated from erosive bamboo slips displayed substantial KL degradation capability. With initial concentrations of 0.5&#x2013;6 g L<SUP>-1</SUP>, at least 31.3% KL could be degraded in 7 days. The maximum degradation rate was 44.4% at the initial concentration of 2 g L<SUP>-1</SUP>. The optimum pH and temperature for KL degradation were 7.0 and 30°C, respectively. Manganese peroxidase (MnP) and laccase (Lac) demonstrated their greatest level of activity, 1685.3 U L<SUP>-1</SUP> and 815.6 U L<SUP>-1</SUP>, at the third and fourth days, respectively. Many small molecule intermediates were formed during the process of KL degradation, as determined using GC-MS analysis. In order to perform metabolic reconstruction of lignin degradation in this bacterium, a draft genome sequence for <I>C. basilensis</I> B-8 was generated. Genomic analysis focused on the catabolic potential of this bacterium against several lignin-derived compounds. These analyses together with sequence comparisons predicted the existence of three major metabolic pathways: <I>&beta;</I>-ketoadipate, phenol degradation, and gentisate pathways.</P><P><B>Conclusion</B></P><P>These results confirmed the capability of <I>C. basilensis</I> B-8 to promote KL degradation. Whole genomic sequencing and systematic analysis of the <I>C. basilensis</I> B-8 genome identified degradation steps and intermediates from this bacterial-mediated KL degradation method. Our findings provide a theoretical basis for research into the mechanisms of lignin degradation as well as a practical basis for biofuel production using lignin materials.</P>

발행연도

2013

발행기관

BioMed Central

라이선스

cc-by

ISSN

1754-6834

6

페이지

pp.1-1

주제어

Cupriavidus basilensis B-8; Kraft lignin; Biodegradation; Characterization; Genomic analysis

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논문; 2013-01-08

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