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13C tracers for glucose degrading pathway discrimination in Gluconobacter oxydans 621H

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논문

13C tracers for glucose degrading pathway discrimination in Gluconobacter oxydans 621H

학술지

Metabolites

저자명

Ostermann, Steffen; Richhardt, Janine; Bringer, Stephanie; Bott, Michael; Wiechert, Wolfgang; Oldiges, Marco

초록

<P><I>Gluconobacter oxydans</I> 621H is used as an industrial production organism due to its exceptional ability to incompletely oxidize a great variety of carbohydrates in the periplasm. With glucose as the carbon source, up to 90% of the initial concentration is oxidized periplasmatically to gluconate and ketogluconates. Growth on glucose is biphasic and intracellular sugar catabolism proceeds via the Entner&#x2013;Doudoroff pathway (EDP) and the pentose phosphate pathway (PPP). Here we studied the <I>in vivo</I> contributions of the two pathways to glucose catabolism on a microtiter scale. In our approach we applied specifically <SUP>13</SUP>C labeled glucose, whereby a labeling pattern in alanine was generated intracellularly. This method revealed a dynamic growth phase-dependent pathway activity with increased activity of EDP in the first and PPP in the second growth phase, respectively. Evidence for a growth phase-independent decarboxylation-carboxylation cycle around the pyruvate node was obtained from <SUP>13</SUP>C fragmentation patterns of alanine. For the first time, down-scaled microtiter plate cultivation together with <SUP>13</SUP>C-labeled substrate was applied for <I>G. oxydans</I> to elucidate pathway operation, exhibiting reasonable labeling costs and allowing for sufficient replicate experiments.</P>

발행연도

2015

발행기관

MDPI

라이선스

cc-by

ISSN

2218-1989

5

3

페이지

pp.455-474

주제어

microtiter cultivation; 13C tracer; pentose phosphate pathway; Entner&#x2013; Doudoroff pathway; glucose;

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1 2023-12-11
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논문; 2015-09-02

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