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Reconstruction and analysis of a genome-scale metabolic network of Corynebacterium glutamicum S9114

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논문

Reconstruction and analysis of a genome-scale metabolic network of Corynebacterium glutamicum S9114

학술지

Gene

저자명

Mei, J.; Xu, N.; Ye, C.; Liu, L.; Wu, J.

초록

Corynebacterium glutamicum S9114 is commonly used for industrial glutamate production. Therefore, a comprehensive understanding of the physiological and metabolic characteristics of C. glutamicum is important for developing its potential for industrial production. A genome-scale metabolic model, iJM658, was reconstructed based on genome annotation and literature mining. The model consists of 658 genes, 984 metabolites and 1065 reactions. The model quantitatively predicted C. glutamicum growth on different carbon and nitrogen sources and determined 129 genes to be essential for cell growth. The iJM658 model predicted that C. glutamicum had two glutamate biosynthesis pathways and lacked eight key genes in biotin synthesis. Robustness analysis indicated a relative low oxygen level (1.21mmol/gDW/h) would improve glutamate production rate. Potential metabolic engineering targets for improving γ-aminobutyrate and isoleucine production rate were predicted by in silico deletion or overexpression of some genes. The iJM658 model is a useful tool for understanding and optimizing the metabolism of C. glutamicum and a valuable resource for future metabolic and physiological research.

발행연도

2016

발행기관

Elsevier/North-Holland

ISSN

0378-1119

ISSN

1879-0038

575

2

페이지

pp.615-622

주제어

Corynebacterium glutamicum S9114; Genome-scale metabolic model; l-Glutamate production; γ-Aminobutyrate production; l-Isoleucine production

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1 2023-12-11
2 2023-12-11

논문; 2016-01-01

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