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Hyperbaric Oxygen Treatment in Spinal Cord Injury Recovery: Profiling Long Noncoding RNAs

메타 데이터

바이오화학분류
    • 화장품용 기능성소재
      1. 계면활성제⁄증점제
    • 의료용 화학소재
      1. 치료제
논문

Hyperbaric Oxygen Treatment in Spinal Cord Injury Recovery: Profiling Long Noncoding RNAs

학술지

Spine

저자명

Liu, Xuehua; Liang, Fang; Sun, Zhencheng; Yang, Jing; Su, Qingjun

초록

<P>Study Design.<P>A functional, transcriptome, and long noncoding RNAs (lncRNAs) expression analysis in the spinal cord of mice after hyperbaric oxygen (HBO) treatment.</P></P><P>Objective.<P>We aimed to explore the mechanism by which HBO treats spinal cord injury (SCI) at the level of lncRNAs.</P></P><P>Summary of Background Data.<P>Immense amounts of research have established that HBO treatment promotes the recovery of neurological function after SCI. The mechanism of action remains to be clarified.</P></P><P>Methods.<P>High-throughput RNA sequencing, Gene Ontology, and Kyoto Encyclopedia of Genes and Genomes enrichment analysis were used to profile lncRNA expression and analyze biological function in the spinal cords of mice from sham-operated, SCI, and HBO-treated groups. The differential expression of lncRNA between the groups was assessed using real-time quantitative polymerase chain reaction.</P></P><P>Results.<P>Differential expression across 577 lncRNAs was identified among the three groups. GO analysis showed that free ubiquitin chain polymerization, ubiquitin homeostasis, DNA replication, synthesis of RNA primer, single-stranded telomeric DNA binding, and alpha-amylase activity were significantly enriched. Kyoto Encyclopedia of Genes and Genomes enrichment analysis displayed that vitamin B6 metabolism, one carbon pool by folate, DNA replication, lysine degradation, beta-alanine metabolism, fanconi anemia pathway, and Notch signal pathway were the main pathways with enrichment significance. LncRNAs NONMMUT 092674.1, NONMMUT042986.2, and NONMMUT018850.2 showed significantly different expression between the SCI and the other two groups (<I>P</I><0.05, <0.01).</P></P><P>Conclusions.<P>This study is the first to determine the expression profiles of lncRNAs in the injured spinal cord after HBO treatment. We identified several important dysregulated lncRNAs in this setting. These results help us better understand the mechanism by which HBO treats SCI and provide new potential therapeutic targets for SCI.</P></P>

발행연도

2023

발행기관

Ovid Technologies (Wolters Kluwer) - Lippincott WilliamsWilkins

ISSN

0362-2436

ISSN

1528-1159

48

3

페이지

pp.213-222

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1 2023-12-11

논문; 2023-02-01

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