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DYNAMIC FLUX BALANCE ANALYSIS FOR PREDICTING GENE OVEREXPRESSION EFFECTS IN BATCH CULTURES

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논문

DYNAMIC FLUX BALANCE ANALYSIS FOR PREDICTING GENE OVEREXPRESSION EFFECTS IN BATCH CULTURES

학술지

Journal of Biological Systems

저자명

BARRETO-RODRIGUEZ, CAROL MILENA; RAMIREZ-ANGULO, JESSICA PAOLA; RAMIREZ, JORGE MARIO GOMEZ; ACHENIE, LUKE; MOLINA-BULLA, HAROLD; BARRIOS, ANDRÉ S FERNANDO GONZÁ LEZ

초록

<P> The advent of numerous technological platforms for genome sequencing has led to increasing understanding and construction of metabolic networks. A popular system engineering strategy is used to analyze microbial metabolic networks is flux balance analysis (FBA). In recent times, there has been a lot of interest in the study of the metabolic network dynamics when genes are overexpressed in the system. Herein, an optimization framework, which employs dynamic flux balance analysis (DFBA) is proposed for predicting ethanol concentration profiles in glycerol fermentations using Escherichia coli. In silico results were experimentally validated by overexpressing alcohol/acetaldehyde dehydrogenase adhE, pyruvate kinase pykF, pyruvate formate-lyase pflB and isoleucine-valine enzymes ilvC and llvL. </P>

발행연도

2014

발행기관

World Scientific

ISSN

0218-3390

ISSN

1793-6470

22

3

페이지

pp.327-338

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1 2023-12-11

논문; 2014-08-28

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