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Transcriptional profiling of hydrogen production metabolism of Rhodobacter capsulatus under temperature stress by microarray analysis

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논문

Transcriptional profiling of hydrogen production metabolism of Rhodobacter capsulatus under temperature stress by microarray analysis

학술지

International journal of molecular sciences

저자명

Gü rgan, Muazzez; Afş ar Erkal, Nilü fer; Ö zgü r, Ebru; Gü ndü z, Ufuk; Eroglu, Inci; Yü cel, Meral

초록

<P>Biohydrogen is a clean and renewable form of hydrogen, which can be produced by photosynthetic bacteria in outdoor large-scale photobioreactors using sunlight. In this study, the transcriptional response of <I>Rhodobacter capsulatus</I> to cold (4 °C) and heat (42 °C) stress was studied using microarrays. Bacteria were grown in 30/2 acetate/glutamate medium at 30 °C for 48 h under continuous illumination. Then, cold and heat stresses were applied for two and six hours. Growth and hydrogen production were impaired under both stress conditions. Microarray chips for <I>R. capsulatus</I> were custom designed by Affymetrix (GeneChip<SUP>&reg;</SUP>. TR_RCH2a520699F). The numbers of significantly changed genes were 328 and 293 out of 3685 genes under cold and heat stress, respectively. Our results indicate that temperature stress greatly affects the hydrogen production metabolisms of <I>R. capsulatus</I>. Specifically, the expression of genes that participate in nitrogen metabolism, photosynthesis and the electron transport system were induced by cold stress, while decreased by heat stress. Heat stress also resulted in down regulation of genes related to cell envelope, transporter and binding proteins. Transcriptome analysis and physiological results were consistent with each other. The results presented here may aid clarification of the genetic mechanisms for hydrogen production in purple non-sulfur (PNS) bacteria under temperature stress.</P>

발행연도

2015

발행기관

MDPI

라이선스

cc-by

ISSN

1661-6596

ISSN

1422-0067

16

6

페이지

pp.13781-13797

주제어

Rhodobacter capsulatus; microarray analysis; gene expression; heat and cold stress

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1 2023-12-11

논문; 2015-06-16

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