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Unexpected stability of Bacteroidetes and Firmicutes communities in laboratory biogas reactors fed with different defined substrates

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논문

Unexpected stability of Bacteroidetes and Firmicutes communities in laboratory biogas reactors fed with different defined substrates

학술지

Applied and environmental microbiology

저자명

Kampmann, K.; Ratering, S.; Kramer, I.; Schmidt, M.; Zerr, W.; Schnell, S.

초록

<P><B>ABSTRACT</B><P> In the present study, bacterial communities in 200-liter biogas reactors containing liquid manure consecutively fed with casein, starch, and cream were investigated over a period of up to 33 days. A 16S rRNA gene clone library identified Bacteroidetes and Firmicutes as the most abundant bacterial groups in the starting material, at 58.9% and 30.1% of sequences, respectively. The community development of both groups was monitored by real-time PCR and single-strand conformation polymorphism (SSCP) analysis. The Firmicutes and Bacteroidetes communities were unexpectedly stable and hardly influenced by batch-feeding events. The continuous feeding of starch led to community shifts that nevertheless contributed to a stable reactor performance. A longer starving period and a change in the pH value resulted in further community shifts within the Bacteroidetes but did not influence the Firmicutes . Predominant DNA bands from SSCP gels were cloned and sequenced. Sequences related to Peptococcaceae , Cytophagales , and Petrimonas sulfuriphila were found in all samples from all experiments. Real-time PCR demonstrated the abundance of members of the phylum Bacteroidetes and also reflected changes in gene copy numbers in conjunction with a changing pH value and acetate accumulation. </P></P>

발행연도

2012

발행기관

American Society for Microbiology

ISSN

0099-2240

ISSN

1098-5336

78

7

페이지

pp.2106-2119

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1 2023-12-11

논문; 2012-04-01

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