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Combinatorial optimization of CO2 transport and fixation to improve succinate production by promoter engineering

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바이오화학분류
    • 바이오플라스틱
      1. 고무
      2. 플라스틱
    • 바이오정밀화학
      1. 용매
      2. 화학제품
    • 화장품용 기능성소재
      1. 계면활성제⁄증점제
    • 의료용 화학소재
      1. 식품첨가제
논문

Combinatorial optimization of CO2 transport and fixation to improve succinate production by promoter engineering

학술지

Biotechnology and bioengineering

저자명

Yu, Jun‐ Han; Zhu, Li‐ Wen; Xia, Shi‐ Tao; Li, Hong‐ Mei; Tang, Ya‐ Ling; Liang, Xin‐ Hua; Chen, Tao; Tang, Ya‐ Jie

초록

<P><B>ABSTRACT</B></P><P>To balance the flux of an engineered metabolic pathway to achieve high yield of target product is a major challenge in metabolic engineering. In previous work, the collaborative regulation of CO<SUB>2</SUB> transport and fixation was investigated with co&#8208;overexpressing exogenous genes regulating both CO<SUB>2</SUB> transport (<I>sbtA</I> and <I>bicA</I>) and PEP carboxylation (phosphoenolpyruvate (PEP) carboxylase (<I>ppc</I>) and carboxykinase (<I>pck</I>)) under trc promoter in <I>Escherichia coli</I> for succinate biosynthesis. For balancing metabolic flux to maximize succinate titer, a combinatorial optimization strategy to fine&#8208;tuning CO<SUB>2</SUB> transport and fixation process was implemented by promoter engineering in this study. Firstly, based on the energy matrix a synthetic promoter library containing 20 rationally designed promoters with strengths ranging from 0.8% to 100% compared with the widely used trc promoter was generated. Evaluations of <I>rfp</I> and <I>cat</I> reporter genes provided evidence that the synthetic promoters were stably and had certain applicability. Secondly, four designed promoters with different strengths were used for combinatorial assembly of single CO<SUB>2</SUB> transport gene (<I>sbtA</I> or <I>bicA</I>) and single CO<SUB>2</SUB> fixation gene (<I>ppc</I> or <I>pck</I>) expression. Three combinations, such as Tang1519 (P<SUB>4</SUB>&#8208;<I>bicA </I>+ pP<SUB>19</SUB>&#8208;<I>pck</I>), Tang1522 (P<SUB>4</SUB>&#8208;<I>sbtA </I>+ P<SUB>4</SUB>&#8208;<I>ppc</I>), Tang1523 (P<SUB>4</SUB>&#8208;<I>sbtA </I>+ P<SUB>17</SUB>&#8208;<I>ppc</I>) with a more than 10% increase in succinate production were screened in bioreactor. Finally, based on the above results, co&#8208;expression of the four transport and fixation genes were further investigated. Co&#8208;expression of <I>sbtA</I>, <I>bicA</I>, and <I>ppc</I> with weak promoter P<SUB>4</SUB> and <I>pck</I> with strong promoter P<SUB>19</SUB> (AFP111/pT&#8208;P<SUB>4</SUB>&#8208;<I>bicA</I>&#8208;P<SUB>4</SUB>&#8208;<I>sbtA </I>+ pACYC&#8208;P<SUB>19</SUB>&#8208;<I>pck</I>&#8208;P<SUB>4</SUB>&#8208;<I>ppc</I>) provided the best succinate production among all the combinations. The highest succinate production of 89.4 g/L was 37.5% higher than that obtained with empty vector control. This work significantly enhanced succinate production through combinatorial optimization of CO<SUB>2</SUB> transport and fixation. The promoter engineering and combinatorial optimization strategies used herein represents a powerful approach to tailor&#8208;making metabolic pathways for the production of other industrially important chemicals. Biotechnol. Bioeng. 2016;113: 1531&ndash;1541. &copy; 2016 Wiley Periodicals, Inc.</P>

발행연도

2016

ISSN

0006-3592

ISSN

1097-0290

113

7

페이지

pp.1531-1541

주제어

Escherichia coli; succinate; synthetic promoter library; combinatorial optimization; metabolic balance

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1 2023-12-11

논문; 2016-12-31

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